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pybedtools 0.6.2 (beta)
Wrapper around BEDTools for bioinformatics work

INSTALL>
pypm install pybedtools

How to install pybedtools

  1. Download and install ActivePython
  2. Open Command Prompt
  3. Type pypm install pybedtools
 Python 2.7Python 3.2Python 3.3
Windows (32-bit)
0.2.2dev
0.6.2 Failed View build log
0.6 Failed View build log
0.6rc1 Failed View build log
0.5.5 Failed View build log
0.5 Failed View build log
0.5rc1 Failed View build log
0.5dev Failed View build log
0.2.2dev Available View build log
0.2.1dev Available View build log
0.2 Available View build log
Windows (64-bit)
0.2.2dev
0.6.2Never BuiltWhy not?
0.6 Failed View build log
0.6rc1 Failed View build log
0.5.5 Failed View build log
0.5 Failed View build log
0.5rc1 Failed View build log
0.5dev Failed View build log
0.2.2dev Available View build log
0.2.1dev Available View build log
0.2 Available View build log
Mac OS X (10.5+)
0.6.2 Available View build log
0.6 Available View build log
0.6rc1 Available View build log
0.5.5 Available View build log
0.5 Available View build log
0.5rc1 Available View build log
0.5dev Available View build log
0.2.2dev Available View build log
0.2.1dev Available View build log
0.2 Available View build log
Linux (32-bit)
0.6.2 Available View build log
0.6 Available View build log
0.6rc1 Available View build log
0.5.5 Available View build log
0.5 Available View build log
0.5rc1 Available View build log
0.5dev Available View build log
0.2.2dev Available View build log
0.2.1dev Available View build log
0.2 Available View build log
Linux (64-bit)
0.6.2 Available View build log
0.6 Available View build log
0.6rc1 Available View build log
0.5.5 Available View build log
0.5 Available View build log
0.5rc1 Available View build log
0.5dev Available View build log
0.2.2dev Available View build log
0.2.1dev Available View build log
0.2 Available View build log
 
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Lastest release
version 0.6.2 on Nov 20th, 2012

pybedtools is a Python extension of Aaron Quinlan's BEDtools suite (http://code.google.com/p/bedtools/), used for comparing genomic features.

pybedtools allows you to intuitively call BEDtools programs from within Python without writing awkward system calls, and allows you to manipulate data on the file level as well as on the individual feature level.

Development version can be found on github:

http://github.com/daler/pybedtools

and see full documentation and tutorial at:

http://packages.python.org/pybedtools

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Last updated Nov 20th, 2012

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