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clipper 0.1
A set of scripts for calling peaks on CLIP-seq data

clipper is unavailable in PyPM, because there aren't any builds for it in the package repositories. Click the linked icons to find out why.

 Python 2.7Python 3.2Python 3.3
Windows (32-bit)
Windows (64-bit)
Mac OS X (10.5+)
Linux (32-bit)
Linux (64-bit)
 
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License
GPL2

CLIPper - CLIP peak enrichment recognition

A tool to detect CLIP-seq peaks.

Install:

Until the next version of scipy comes out we are stuck using rc1. Get it here: http://sourceforge.net/projects/scipy/files/scipy/0.11.0rc1/ and install like a normal python package.

Then

easy_install clipper

or

python setup.py install

Run

clipper -h

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